Ordination and Multivariate Analysis for Ecology


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Documentation for package ‘labdsv’ version 1.4-1

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abuocc Abundance/Occurrence Graphical Analysis
bestnmds Nonmetric Multidimensional Scaling
brycesite Site Data for Bryce Canyon National Park
bryceveg Bryce Canyon Vegetation Data
chullord.nmds Plotting Routines For Nonmetric Multi-dimensional Scaling Ordinations
chullord.pca Plotting Routines For Principal Components Ordinations
chullord.pco Plotting Routines For Principal Coordinates Ordinations
const Constancy Table
dematrify Create Three Column Database Form Data Frame from Sparse Data Frames
density.nmds Plotting Routines For Nonmetric Multi-dimensional Scaling Ordinations
density.pco Plotting Routines For Principal Coordinates Ordinations
dga Direct Gradient Analysis
disana Dissimilarity Analysis
dropplt Dropping Plots with Missing Values Form Taxon and Site Data Frames
dropspc Dropping Species with Few Occurrences
dsvdis Dissimilarity Indices and Distance Measures
envrtest Environmental Distribution Test
euclidify Nearest Euclidean Space Representation of a Dissimilarity Object
hilight.nmds Plotting Routines For Nonmetric Multi-dimensional Scaling Ordinations
hilight.pca Plotting Routines For Principal Components Ordinations
hilight.pco Plotting Routines For Principal Coordinates Ordinations
importance Importance Table
indspc Compositional Indicator Species Analysis
indval Dufrene-Legendre Indicator Species Analysis
indval.default Dufrene-Legendre Indicator Species Analysis
indval.stride Dufrene-Legendre Indicator Species Analysis
isamic Indicator Species Analysis Minimizing Intermediate Occurrences
loadings.pca Principal Components Analysis
matrify Create Taxon Data.Frames From Three Column Database Form
metrify Nearest Metric Space Representation of a Dissimilarity Object
nmds Nonmetric Multidimensional Scaling
ordcomp Ordination to Dissimilarity Comparison
orddist Ordination Point Pair-Wise Distance Calculation
ordpart Ordination Partitioning
ordpart.nmds Ordination Partitioning
ordpart.pca Ordination Partitioning
ordpart.pco Ordination Partitioning
ordtaxa Re-Order the Rows and Columns of a Taxon Data Frame
ordtest Ordination Distribution Test
pca Principal Components Analysis
pco Principal Coordinates Analysis
plot.indspc Compositional Indicator Species Analysis
plot.nmds Plotting Routines For Nonmetric Multi-dimensional Scaling Ordinations
plot.pca Plotting Routines For Principal Components Ordinations
plot.pco Plotting Routines For Principal Coordinates Ordinations
plot.thull Plotting a Tensioned Hull
plotid.nmds Plotting Routines For Nonmetric Multi-dimensional Scaling Ordinations
plotid.pca Plotting Routines For Principal Components Ordinations
plotid.pco Plotting Routines For Principal Coordinates Ordinations
points.nmds Plotting Routines For Nonmetric Multi-dimensional Scaling Ordinations
points.pca Plotting Routines For Principal Components Ordinations
points.pco Plotting Routines For Principal Coordinates Ordinations
raretaxa Identify Rare Taxa in a Data Set
rgl.nmds Plotting Routines For Nonmetric Multi-dimensional Scaling Ordinations
rnddist Random Distance
rndtaxa Randomize a Taxa Data.Frame
scores.pca Principal Components Analysis
spcdisc Species Discrimination Analysis
summary.indval Dufrene-Legendre Indicator Species Analysis
summary.pca Principal Components Analysis
surf.nmds Plotting Routines For Nonmetric Multi-dimensional Scaling Ordinations
surf.pca Plotting Routines For Principal Components Ordinations
surf.pco Plotting Routines For Principal Coordinates Ordinations
thull Plotting a Tensioned Hull
thull.nmds Plotting Routines For Nonmetric Multi-dimensional Scaling Ordinations
thull.pco Plotting Routines For Principal Coordinates Ordinations
varplot.pca Plotting Routines For Principal Components Ordinations
vegtab Vegetation Table
vegtrans Vegetation Data Transformation