biclust {biclust} | R Documentation |
The function biclust
is the main function of the package. It calculates the bicluster in a data matrix using the algorithm specified in the method-argument.
Currently the package contains 5 different methods for the use in biclust
. For each algorithm see the class help files for further details.
For some algorithms preproccessing is necessary, e.g. BCBimax
only runs with a logical matrix.
## S4 method for signature 'matrix,BiclustMethod' biclust(x,method,...) ## S4 method for signature 'matrix,character' biclust(x,method,...)
x |
Data matrix. |
method |
An object of class |
... |
Additional Parameters of the |
Returns an object of class Biclust
.
Sebastian Kaiser sebastian.kaiser@stat.uni-muenchen.de
Biclust-class
, BCCC
, BCXmotifs
, BCPlaid
, BCSpectral
, BCBimax
, BCQuest
, BiclustMethod-class
test <- matrix(rbinom(400, 50, 0.4), 20, 20) res1 <- biclust(test, method=BCCC(), delta=1.5, alpha=1, number=10)