exonIDs {DEXSeq}R Documentation

Accessor for the exonIDs in an ExonCountSet object.

Description

This function is an accessor for the exon identifiers for each of the rows in the count table. Note that each exon ID identifies, strictly speaking, not an exon but a counting bin, which may well be just part of an exon. Make sure that the exon IDs are ordered alphanumerically in the gene.

Usage

exonIDs(ecs)
exonIDs(ecs) <- value

Arguments

ecs

An ExonCountSet object.

value

A vector of exon counting bin identifiers, one for each of the rows of the count data.

Examples

	library(DEXSeq)
   	data("pasillaExons", package="pasilla")
	exonIDs(pasillaExons)

[Package DEXSeq version 1.0.2 Index]