DEUresultTable {DEXSeq} | R Documentation |
This function returns a data frame with the summary of the results from the analysis workflow.
It accesses the fData
slots with information of the dispersion estimates obtained
from the function fitDispersionFunction
, the p values, and adjusted p values
obtained from the function testForDEU
, and log2 fold changes obtained
from the function estimatelog2FoldChanges
.
DEUresultTable(ecs)
ecs |
An ExonCountSet object. |
A data frame with a summary of the analysis workflow.
## Not run: data("pasillaExons", package="pasilla") pasillaExons <- estimateSizeFactors( pasillaExons ) pasillaExons <- estimateDispersions( pasillaExons ) pasillaExons <- fitDispersionFunction( pasillaExons ) pasillaExons <- testForDEU( pasillaExons ) res <- DEUresultTable( pasillaExons ) ## End(Not run)