Package Bio :: Module StdHandler
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Module Bio.StdHandler

Classes
ConvertDispatchHandler Used to read records and produce output through a Dispatcher
ConvertHandler Used to read records and produce output
Feature  
Handle_dbid  
Handle_dbxref  
Handle_description  
Handle_feature_location  
Handle_feature_qualifier  
Handle_features  
Handle_hsp  
Handle_hsp_seqalign  
Handle_search_header  
Handle_search_info  
Handle_search_table  
Handle_sequence  
RecognizeHandler  

Function Summary
  add_first_text_handler(klass, tag, attrname)
  add_int_handler(klass, tag, attrname)
  add_text_block_handler(klass, tag, joinattr, defaultjoin, attrname)
  add_text_decode_handler(klass, tag, attrname)
  add_text_dict_handler(klass, tag, attrname, key)
  add_text_handler(klass, tag, attrname)
  add_value_handler(klass, tag, attrname)
  _fast_dbxref_sp_embl(s)
  _fast_dbxref_sp_general(s)
  _fast_dbxref_sp_prosite(s)
  _fixup_sp_pattern(exp)

Variable Summary
dict _fast_dbxref_parser_table = {'sp-prosite': <function _fa...
NoneType _fast_dbxref_sp_embl_data = None                                                                  
NoneType _fast_dbxref_sp_general_data = None                                                                  
NoneType _fast_dbxref_sp_prosite_data = None                                                                  

Variable Details

_fast_dbxref_parser_table

Type:
dict
Value:
{'sp-embl': <function _fast_dbxref_sp_embl at 0x70c2ec30>,
 'sp-general': <function _fast_dbxref_sp_general at 0x70c2ebb0>,
 'sp-prosite': <function _fast_dbxref_sp_prosite at 0x70c2ebf0>}       

_fast_dbxref_sp_embl_data

Type:
NoneType
Value:
None                                                                  

_fast_dbxref_sp_general_data

Type:
NoneType
Value:
None                                                                  

_fast_dbxref_sp_prosite_data

Type:
NoneType
Value:
None                                                                  

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