Package Bio :: Package expressions :: Module fasta
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Module Bio.expressions.fasta

Function Summary
  make_1id(s, dbname, name)
  make_2id(s, dbname, primary_name, secondary_name)

Variable Summary
MaxRepeat comment_lines = <Martel.Expression.MaxRepeat instance at...
HeaderFooter format = <Martel.Expression.HeaderFooter instance at 0x7...
Group generic_term = <Martel.Expression.Group instance at 0x70...
Seq gnl_id = <Martel.Expression.Seq instance at 0x70c377b0>
Alt id_term = <Martel.Expression.Alt instance at 0x70c37cb0>
list ids = [<Martel.Expression.Seq instance at 0x70c32878>, <...
Seq ncbi_term = <Martel.Expression.Seq instance at 0x70c37b7...
Group ncbi_word = <Martel.Expression.Group instance at 0x70c37...
Group record = <Martel.Expression.Group instance at 0x70c3e378...
Seq seqline = <Martel.Expression.Seq instance at 0x70c3e170>
Seq seqline_nonewline = <Martel.Expression.Seq instance at 0...
Group sequence = <Martel.Expression.Group instance at 0x70c3e3...
Seq title = <Martel.Expression.Seq instance at 0x70c37fd0>

Variable Details

comment_lines

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0x70c37d78>                   

format

Type:
HeaderFooter
Value:
<Martel.Expression.HeaderFooter instance at 0x70c3e418>                

generic_term

Type:
Group
Value:
<Martel.Expression.Group instance at 0x70c37c60>                       

gnl_id

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x70c377b0>                         

id_term

Type:
Alt
Value:
<Martel.Expression.Alt instance at 0x70c37cb0>                         

ids

Type:
list
Value:
[<Martel.Expression.Seq instance at 0x70c32878>,
 <Martel.Expression.Seq instance at 0x70c32a58>,
 <Martel.Expression.Seq instance at 0x70c32c10>,
 <Martel.Expression.Seq instance at 0x70c32dc8>,
 <Martel.Expression.Seq instance at 0x70c32e90>,
 <Martel.Expression.Seq instance at 0x70c32f80>,
 <Martel.Expression.Seq instance at 0x70c37198>,
 <Martel.Expression.Seq instance at 0x70c37350>,
...                                                                    

ncbi_term

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x70c37b70>                         

ncbi_word

Type:
Group
Value:
<Martel.Expression.Group instance at 0x70c37aa8>                       

record

Type:
Group
Value:
<Martel.Expression.Group instance at 0x70c3e378>                       

seqline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x70c3e170>                         

seqline_nonewline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x70c3e1c0>                         

sequence

Type:
Group
Value:
<Martel.Expression.Group instance at 0x70c3e300>                       

title

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x70c37fd0>                         

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