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Package Bio :: Package expressions :: Package blast :: Module wublast |
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Function Summary | |
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main(outf)
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Variable Summary | |
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Group |
blastn = <Martel.Expression.Group instance at 0x712d2170...
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Seq |
blastn_appheader = <Martel.Expression.Seq instance at 0x...
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Seq |
blastn_ending = <Martel.Expression.Seq instance at 0x712...
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Seq |
blastn_hsp_header = <Martel.Expression.Seq instance at 0...
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Seq |
blastn_identities = <Martel.Expression.Seq instance at 0...
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Seq |
blastn_score = <Martel.Expression.Seq instance at 0x7122...
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Seq |
blastn_strand = <Martel.Expression.Seq instance at 0x712...
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Group |
blastp = <Martel.Expression.Group instance at 0x712a83a0...
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Seq |
blastp_appheader = <Martel.Expression.Seq instance at 0x...
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Seq |
blastp_ending = <Martel.Expression.Seq instance at 0x712...
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Seq |
blastp_hsp_header = <Martel.Expression.Seq instance at 0...
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Seq |
blastp_score = <Martel.Expression.Seq instance at 0x7122...
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Group |
blastx = <Martel.Expression.Group instance at 0x712fa710...
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Seq |
blastx_appheader = <Martel.Expression.Seq instance at 0x...
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Seq |
blastx_ending = <Martel.Expression.Seq instance at 0x712...
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Seq |
blastx_hsp_header = <Martel.Expression.Seq instance at 0...
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Seq |
blastx_identities = <Martel.Expression.Seq instance at 0...
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Seq |
blastx_score = <Martel.Expression.Seq instance at 0x7122...
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Seq |
blastx_strand = <Martel.Expression.Seq instance at 0x712...
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Seq |
blastx_table_entry = <Martel.Expression.Seq instance at ...
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Seq |
blastx_to_database = <Martel.Expression.Seq instance at ...
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Seq |
ending = <Martel.Expression.Seq instance at 0x7125cb70>
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Seq |
ending_start = <Martel.Expression.Seq instance at 0x7124...
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Group |
format = <Martel.Expression.Group instance at 0x71283530...
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Group |
header = <Martel.Expression.Group instance at 0x71232cd8...
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Seq |
hit_descr = <Martel.Expression.Seq instance at 0x71172cb...
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Seq |
hit_length = <Martel.Expression.Seq instance at 0x711728...
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Seq |
identities = <Martel.Expression.Seq instance at 0x712366...
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MaxRepeat |
parameters = <Martel.Expression.MaxRepeat instance at 0x...
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Seq |
query_database = <Martel.Expression.Seq instance at 0x71...
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Seq |
spaces_line = <Martel.Expression.Seq instance at 0x711ae...
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Seq |
statistics = <Martel.Expression.Seq instance at 0x7125cb...
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Seq |
table_entry = <Martel.Expression.Seq instance at 0x71221...
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Group |
tblastn = <Martel.Expression.Group instance at 0x7131ddf...
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Seq |
tblastn_appheader = <Martel.Expression.Seq instance at 0...
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Seq |
tblastn_hsp_header = <Martel.Expression.Seq instance at ...
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Seq |
tblastn_identities = <Martel.Expression.Seq instance at ...
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Seq |
tblastn_score = <Martel.Expression.Seq instance at 0x712...
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Seq |
tblastn_strand = <Martel.Expression.Seq instance at 0x71...
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Seq |
tblastx_appheader = <Martel.Expression.Seq instance at 0...
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Seq |
timestamp = <Martel.Expression.Seq instance at 0x71255a5...
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Seq |
to_table = <Martel.Expression.Seq instance at 0x71221530...
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Seq |
wublast_version = <Martel.Expression.Seq instance at 0x7...
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Variable Details |
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blastn
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blastn_appheader
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blastn_ending
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blastn_hsp_header
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blastn_identities
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blastn_score
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blastn_strand
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blastp
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blastp_appheader
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blastp_ending
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blastp_hsp_header
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blastp_score
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blastx
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blastx_appheader
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blastx_ending
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blastx_hsp_header
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blastx_identities
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blastx_score
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blastx_strand
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blastx_table_entry
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blastx_to_database
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ending
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ending_start
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format
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header
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hit_descr
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hit_length
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identities
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parameters
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query_database
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spaces_line
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statistics
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table_entry
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tblastn
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tblastn_appheader
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tblastn_hsp_header
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tblastn_identities
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tblastn_score
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tblastn_strand
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tblastx_appheader
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timestamp
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to_table
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wublast_version
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